Genistein methylates the fetal epigenome

Dolinoy, et. al. Environ Health Perspect 114:567-72 (2006)

Maternal dietary genistein supplementation of mice during gestation was shown in this paper to shift the coat color of Avy offspring from yellow to pseudoagouti by altering the epigenome rather than mutating the genome; a clear example of nature via nurture. Genistein, the major phytoestrogen in soy, is linked to diminished female reproductive performance and to cancer chemoprevention and decreased adipose deposition. Dietary genistein may also play a role in the decreased incidence of cancer in Asians compared with Westerners, as well as increased cancer incidence in Asians immigrating to the United States.

  • Science News
    April 24, 2006
    Nurture takes the spotlight decoding the environment's role in...
  • Duke Med News
    March 26, 2006
    Prenatal genistein in soy reduces obesity in offspring via...

August 9, 2012

Genome-wide prediction of imprinted murine genes

Luedi, et. al. Genome Res 15:875-84 (2005)

A machine learning approach was used to both identify imprinted gene candidates and predict their parental expression preference across the entire mouse genome. This subset of genes is particularly important medically becasue imprinted genes could function as targets for linking environmental exposures during pregnancy to the susceptibility of developing chronic disorders as adults. Among those predicted to be imprinted are strong candidate genes for complex human conditions where parent-of-origin inheritance is involved, including Alzheimer disease, autism, bipolar disorder, diabetes, male sexual orientation, obesity, and schizophrenia.

  • Wall Street Journal
    June 23, 2005
    Imprinted genes offer key to some diseases and to possible cures

August 9, 2012

Nobel symposium lecture

Dr Jirtle was invited to speak at the Nobel Symposium on Epigenetic Reprogramming in Development and Disease, held June 19-21, 2004 in Stockholm. He spoke on the “Biological Consequences of the Divergent Evolution of M6P/IGF2R Imprinting".

August 9, 2012

You are what your mother ate!

Waterland and Jirtle. Mol Cell Biol 23:5293-300 (2003)

Dietary supplementation with extra folic acid, vitamin B(12), choline, and betaine alters the phenotype of Agouti mouse offspring via increased CpG methylation, suggesting that dietary supplementation, long presumed to be purely beneficial, may have unintended deleterious influences on the establishment of epigenetic gene regulation in humans.

  • Wall Street Journal
    August 21, 2003
    Diet during pregnancy may have effects lasting into adulthood
  • Wall Street Journal
    August 14, 2003
    Chubby blonde? Slim and dark? Lab mice take after mom's diet
  • Guardian
    August 6, 2003
    Vitamins change colour of baby mice
  • Nature
    August 3, 2003
    Mother's diet changes pups' colour
  • BBC News
    July 31, 2003
    Maternal diet vital to offspring
  • DukeMed News
    July 31, 2003
    Common nutrients fed to pregnant mice altered their offspring's...
  • HealthScout
    July 31, 2003
    What mom eats can change coat color in offspring
  • Herald-Sun
    July 31, 2003
    Duke study may push research past gene mutations
  • New Scientist
    July 31, 2003
    You are what your mother ate, suggests study
  • ScienCentral News
    July 31, 2003
    Blame your mother

August 6, 2012

Callipyge mutation identified

Freking, et. al. Genome Res 12:1496-506 (2002)

A small genetic region near the telomere of ovine chromosome 18 was previously shown to carry the mutation causing the callipyge muscle hypertrophy phenotype in sheep. The mutation lies in a region of high homology among mouse, sheep, cattle, and humans, but not in any previously identified expressed transcript. Initial functional analysis indicates the sequence encompassing the mutation is part of a novel transcript expressed in sheep fetal muscle named CLPG1.

  • ABC Rural News
    September 15, 2002
    Researchers discover the Schwarzenegger of sheep
  • Actualiteiten
    September 15, 2002
    Gen voor grote, gespierde billen
  • AgBiotechNet
    September 15, 2002
    'Beautiful buttocks' pinned down
  • ARS News
    September 15, 2002
    Sheep genes may aid medical researchers
  • CBC News
    September 15, 2002
    Big-bottomed sheep show rare mutation for muscle
  • Chicago Tribune
    September 15, 2002
    The mystery behind a sheep's behind
  • Daily Mail
    September 15, 2002
    Why your bum looks big in this
  • DukeMed News
    September 15, 2002
    Big-bottomed sheep have a rare genetic mutation that builds...
  • Health Scout News
    September 15, 2002
    Bah-uns of steel: muscular sheep have gene mutation that...
  • Nature
    September 15, 2002
    Mutation gives sheep beautiful buttocks DNA change between genes...
  • Nature Rev Genet
    September 15, 2002
    More than just a pretty face
  • Noticias locas
    September 15, 2002
    Aislan el gen del culo gordo
  • Toronto Star
    September 15, 2002
    Science gives Aphrodite a pain in the butt
  • UPI
    September 15, 2002
    Big-bottomed sheep a genetic mystery
  • USA Today
    September 15, 2002
    Scientists get to the bottom of a big sheep mystery
  • Ylift
    September 15, 2002
    You want an ass like a sheep? Maybe...

August 6, 2012

Divergent evolution in M6P/IGF2R imprinting: implications for cloning and cancer

Killian, et. al. Hum Mol Genet 10:1721-8 (2001)

M6P/IGF2R imprinting first appeared approximately 150 million years ago following the divergence of prototherian from therian mammals. Following this, M6P/IGF2R is imprinted in Artiodactyla, as it is in Rodentia and Marsupialia, but not in Scandentia, Dermoptera and Primates, including ringtail lemurs and humans. The absence of M6P/IGF2R imprinting in extant primates, due to its disappearance from the primate lineage over 75 million years ago, demonstrates that imprinting at this locus does not predispose to human disease. Moreover, the divergent evolution of M6P/IGF2R imprinting predicts that the success of in vitro embryo procedures such as cloning may be species dependent.

  • JAMA
    February 28, 1997
    Epigenetics is seen as possible key to cloning
  • BBC Frontiers
    February 28, 1997
    Interview: human cloning
  • DukeMed News
    February 28, 1997
    Humans may be easier to clone than sheep and mice because of a...
  • JNCI
    February 28, 1997
    Platypus study answers questions about gene imprinting
  • New York Times
    February 28, 1997
    Researchers discount a caution in debate over cloned humans
  • Science News
    February 28, 1997
    Dolly was lucky: scientists warn that cloning is too dangerous...

August 6, 2012

Marsupials and eutherians reunited

Killian, et. al. Mamm Genome 12:513-7 (2001)

The three living divisions of mammals are monotremes, marsupials and 'placental' mammals. Determining the sister relationships among these three groups is the most fundamental question in mammalian evolution. Statistical analysis of the M6P/IGF2R unambiguously supports the morphology-based Theria hypothesis of mammalian evolution that excludes monotremes from a clade of marsupials and eutherians.

  • BBC News
    July 16, 2001
    Another leap in the evolution debate
  • BBC Radio
    July 16, 2001
    Interview on mammalian evolution
  • DukeMed News
    July 16, 2001
    Kangaroo, platypus not related after all: Duke scientists refute...
  • The Times
    July 16, 2001
    Kangaroo finding is a leap forward

August 6, 2012

Imprinting of PEG3

Murphy, et. al. Genomics 71:110-7 (2001)

The paternally expressed Peg3 gene in mice encodes an unusual Kruppel-type zinc finger protein implicated in critical cellular and behavioral functions including growth, apoptosis, and maternal nurturing behavior. The imprinted status of PEG3 throughout life coupled with its neural expression and putative roles in regulating cell growth suggests that PEG3 may be a susceptibility locus for cancer as well as neurobehavioral deficits.

  • Duke Chronicle
    January 9, 2001
    Scientists discover imprinted gene on chromosome 19: a gene that...
  • Duke Dialogue
    January 9, 2001
    Imprinted gene found on human chromosome 19: mouse version...

August 6, 2012

M6P/IGF2R imprinting evolution in mammals

Killian, et. al. Mol Cell 5:707-16 (2000)

M6P/IGF2R is not imprinted in monotremes and does not encode for a receptor that binds IGF2. In contrast, M6P/IGF2R is imprinted in a didelphid marsupial, the opossum, but it strikingly lacks the element postulated to be involved in imprint control. Thus, invasive placentation and gestational fetal growth are not required for imprinted genes to evolve. These results also suggest that these two functions evolved in a mammalian clade exclusive of monotremes.

  • Duke Dialogue
    April 4, 2000
    Platypus and opossum studies reveal origin of genetic battle of...
  • Guardian
    April 4, 2000
    Put in on the bill
  • New Scientist
    April 4, 2000
    Mum versus Dad: a genetic battle is being fought inside...

August 6, 2012